---
title: "Regina Barzilay — all works — Elamur Research"
description: "All 281 works of Regina Barzilay in the Elamur Research library, the most cited first: our summaries where we have them, else the original."
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---
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# Regina Barzilay — all works

281 works · page 1 of 3 · 1–100 · [← Regina Barzilay](https://md.research.elamur.ai/free/en/authors/regina-barzilay/)

**1** [2](https://md.research.elamur.ai/free/en/authors/regina-barzilay/works/page/2/) [3](https://md.research.elamur.ai/free/en/authors/regina-barzilay/works/page/3/) [next →](https://md.research.elamur.ai/free/en/authors/regina-barzilay/works/page/2/)

1. **[De novo design of protein structure and function with RFdiffusion ↗](https://doi.org/10.1038/s41586-023-06415-8) Nature · no summary yet**Joseph L. Watson et al.*2023 · 2,342 citations*
2. **[Analyzing Learned Molecular Representations for Property Prediction ↗](https://doi.org/10.1021/acs.jcim.9b00237) Journal of Chemical Information and Modeling · no summary yet**Kevin Yang et al.*2019 · 1,932 citations*
3. [**Using Lexical Chains for Text Summarization Intelligent Scalable Text Summarization**Regina Barzilay, Michael Elhadad*1997 · 992 citations*](https://md.research.elamur.ai/free/en/papers/barzilay-1997-lexical-chains-text-summarization/)
4. [**Style Transfer from Non-Parallel Text by Cross-Alignment**Tianxiao Shen, Tao Lei, Regina Barzilay, et al.*Machine translation · 979 citations*](https://md.research.elamur.ai/free/en/papers/shen-2017-style-transfer-non-parallel-text/)
5. **[Rationalizing Neural Predictions](https://md.research.elamur.ai/free/en/papers/lei-2016-rationalizing-neural-predictions/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Tao Lei, Regina Barzilay, Tommi Jaakkola*2016 · 949 citations*
6. **[Modeling Local Coherence: An Entity-Based Approach](https://md.research.elamur.ai/free/en/papers/barzilay-2008-modeling-local-coherence-entity-based/) [Computational Linguistics](https://md.research.elamur.ai/free/en/venues/cl/)**Regina Barzilay, Mirella Lapata*2008 · 917 citations*
7. **[Junction Tree Variational Autoencoder for Molecular Graph Generation ↗](https://arxiv.org/abs/1802.04364) arXiv (Cornell University) · no summary yet**Wengong Jin, Regina Barzilay, Tommi Jaakkola*2018 · 777 citations*
8. **[A Deep Learning Mammography-based Model for Improved Breast Cancer Risk Prediction ↗](https://doi.org/10.1148/radiol.2019182716) Radiology · no summary yet**Adam Yala et al.*2019 · 758 citations*
9. [**Extracting Paraphrases from a Parallel Corpus**Regina Barzilay, Kathleen R. McKeown*Machine translation · 692 citations*](https://md.research.elamur.ai/free/en/papers/barzilay-2001-extracting-paraphrases-parallel-corpus/)
10. **[Boltz-2: Towards Accurate and Efficient Binding Affinity Prediction ↗](https://doi.org/10.1101/2025.06.14.659707) bioRxiv (Cold Spring Harbor Laboratory) · no summary yet**Saro Passaro et al.*2025 · 674 citations*
11. [**Learning to Paraphrase: An Unsupervised Approach Using Multiple-Sequence Alignment**Regina Barzilay, Lillian Lee*Machine translation · 622 citations*](https://md.research.elamur.ai/free/en/papers/barzilay-2003-learning-paraphrase-unsupervised-approach-multiple/)
12. **[Sentence Fusion for Multidocument News Summarization](https://md.research.elamur.ai/free/en/papers/barzilay-2005-sentence-fusion-multidocument-news-summarization/) [Computational Linguistics](https://md.research.elamur.ai/free/en/venues/cl/)**Regina Barzilay, Kathleen R. McKeown*2005 · 549 citations*
13. **[Learning to Automatically Solve Algebra Word Problems ↗](https://aclanthology.org/P14-1026/) Proceedings of the 52nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers) · no summary yet**Nate Kushman et al.*2014 · 493 citations*
14. **[Boltz-1 Democratizing Biomolecular Interaction Modeling ↗](https://doi.org/10.1101/2024.11.19.624167) bioRxiv (Cold Spring Harbor Laboratory) · no summary yet**Jeremy Wohlwend et al.*2024 · 491 citations*
15. **[Information Fusion in the Context of Multi-Document Summarization](https://md.research.elamur.ai/free/en/papers/barzilay-1999-information-fusion-context-multi-document/) [Annual Meeting of the Association for Computational Linguistics (ACL)](https://md.research.elamur.ai/free/en/venues/acl/)**Regina Barzilay, Kathleen R. McKeown, Michael Elhadad*1999 · 482 citations*
16. **[Convolutional Embedding of Attributed Molecular Graphs for Physical Property Prediction ↗](https://doi.org/10.1021/acs.jcim.6b00601) Journal of Chemical Information and Modeling · no summary yet**Connor W. Coley et al.*2017 · 477 citations*
17. **[Graph neural networks ↗](https://doi.org/10.1038/s43586-024-00294-7) Nature Reviews Methods Primers · no summary yet**Gabriele Corso et al.*2024 · 457 citations*
18. **[Catching the Drift: Probabilistic Content Models, with Applications to Generation and Summarization](https://md.research.elamur.ai/free/en/papers/barzilay-2004-catching-drift-probabilistic-content-models/) [Conference of the North American Chapter of the Association for Computational Linguistics (NAACL)](https://md.research.elamur.ai/free/en/venues/naacl/)**Regina Barzilay, Lillian Lee*2004 · 417 citations*
19. **[Inferring Strategies for Sentence Ordering in Multidocument News Summarization ↗](https://doi.org/10.1613/jair.991) Journal of Artificial Intelligence Research · no summary yet**Regina Barzilay, Noémie Elhadad*2002 · 394 citations*
20. **[Applications of Deep Learning in Molecule Generation and Molecular Property Prediction ↗](https://doi.org/10.1021/acs.accounts.0c00699) Accounts of Chemical Research · no summary yet**W. Patrick Walters, Regina Barzilay*2020 · 386 citations*
21. **[Language Understanding for Text-based Games Using Deep Reinforcement Learning](https://md.research.elamur.ai/free/en/papers/narasimhan-2015-language-understanding-text-based-games/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Karthik Narasimhan, Tejas Kulkarni, Regina Barzilay*2015 · 380 citations*
22. **[Multiple Aspect Ranking Using the Good Grief Algorithm ↗](https://aclanthology.org/N07-1038/) Human Language Technologies 2007: The Conference of the North American Chapter of the Association for Computational Linguistics; Proceedings of the Main Conference · no summary yet**Benjamin Snyder, Regina Barzilay*2007 · 356 citations*
23. **[DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking ↗](https://arxiv.org/abs/2210.01776) arXiv (Cornell University) · no summary yet**Gabriele Corso et al.*2022 · 355 citations*
24. **[Deep learning-guided discovery of an antibiotic targeting Acinetobacter baumannii ↗](https://doi.org/10.1038/s41589-023-01349-8) Nature Chemical Biology · no summary yet**Gary Liu et al.*2023 · 353 citations*
25. **[Reinforcement Learning for Mapping Instructions to Actions ↗](https://aclanthology.org/P09-1010/) Proceedings of the Joint Conference of the 47th Annual Meeting of the ACL and the 4th International Joint Conference on Natural Language Processing of the AFNLP · no summary yet**S.R.K. Branavan et al.*2009 · 340 citations*
26. **[Uncertainty Quantification Using Neural Networks for Molecular Property Prediction ↗](https://doi.org/10.1021/acs.jcim.0c00502) Journal of Chemical Information and Modeling · no summary yet**Lior Hirschfeld et al.*2020 · 339 citations*
27. **[IJCAI'05 Proceedings of the 19th international joint conference on Artificial intelligence ↗](https://openalex.org/W2608651664) no summary yet**Mirella Lapata, Regina Barzilay*2005 · 333 citations*
28. **[Paraphrasing for Automatic Evaluation](https://md.research.elamur.ai/free/en/papers/kauchak-2006-paraphrasing-automatic-evaluation/) [Conference of the North American Chapter of the Association for Computational Linguistics (NAACL)](https://md.research.elamur.ai/free/en/venues/naacl/)**David Kauchak, Regina Barzilay*2006 · 323 citations*
29. **[Towards Debiasing Fact Verification Models](https://md.research.elamur.ai/free/en/papers/schuster-2019-debiasing-fact-verification-models/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Tal Schuster, Darsh Shah, Yun Jie Serene Yeo, et al.*2019 · 301 citations*
30. **[Cross-Lingual Alignment of Contextual Word Embeddings, with Applications to Zero-shot Dependency Parsing](https://md.research.elamur.ai/free/en/papers/schuster-2019-cross-lingual-alignment-contextual-word/) [Conference of the North American Chapter of the Association for Computational Linguistics (NAACL)](https://md.research.elamur.ai/free/en/venues/naacl/)**Tal Schuster, Ori Ram, Regina Barzilay, et al.*2019 · 298 citations*
31. **[Bayesian Unsupervised Topic Segmentation](https://md.research.elamur.ai/free/en/papers/eisenstein-2008-bayesian-unsupervised-topic-segmentation/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Jacob Eisenstein, Regina Barzilay*2008 · 298 citations*
32. **[Mammographic Breast Density Assessment Using Deep Learning: Clinical Implementation ↗](https://doi.org/10.1148/radiol.2018180694) Radiology · no summary yet**Constance Dobbins Lehman et al.*2018 · 295 citations*
33. **[Get Your Vitamin C! Robust Fact Verification with Contrastive Evidence](https://md.research.elamur.ai/free/en/papers/schuster-2021-get-your-vitamin-c-robust/) [Conference of the North American Chapter of the Association for Computational Linguistics (NAACL)](https://md.research.elamur.ai/free/en/venues/naacl/)**Tal Schuster, Adam Fisch, Regina Barzilay*2021 · 290 citations*
34. **[Toward robust mammography-based models for breast cancer risk ↗](https://doi.org/10.1126/scitranslmed.aba4373) Science Translational Medicine · no summary yet**Adam Yala et al.*2021 · 281 citations*
35. **[Sentence Alignment for Monolingual Comparable Corpora](https://md.research.elamur.ai/free/en/papers/barzilay-2003-sentence-alignment-monolingual-comparable-corpora/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Regina Barzilay, Noemie Elhadad*2003 · 281 citations*
36. **[Minimum Cut Model for Spoken Lecture Segmentation](https://md.research.elamur.ai/free/en/papers/malioutov-2006-minimum-cut-model-spoken-lecture/) [Annual Meeting of the Association for Computational Linguistics (ACL)](https://md.research.elamur.ai/free/en/venues/acl/)**Igor Malioutov, Regina Barzilay*2006 · 271 citations*
37. **[Collective Content Selection for Concept-to-Text Generation](https://md.research.elamur.ai/free/en/papers/barzilay-2005-collective-content-selection-concept-text/) [Human Language Technology Conference (HLT)](https://md.research.elamur.ai/free/en/venues/hlt/)**Regina Barzilay, Mirella Lapata*2005 · 262 citations*
38. **[Automatic evaluation of text coherence: models and representations ↗](https://openalex.org/W1503071992) no summary yet**Mirella Lapata, Regina Barzilay*2005 · 251 citations*
39. **[Current and Future Roles of Artificial Intelligence in Medicinal Chemistry Synthesis ↗](https://doi.org/10.1021/acs.jmedchem.9b02120) Journal of Medicinal Chemistry · no summary yet**Thomas J. Struble et al.*2020 · 245 citations*
40. **[Selective Sharing for Multilingual Dependency Parsing](https://md.research.elamur.ai/free/en/papers/naseem-2012-selective-sharing-multilingual-dependency-parsing/) [Annual Meeting of the Association for Computational Linguistics (ACL)](https://md.research.elamur.ai/free/en/venues/acl/)**Tahira Naseem, Regina Barzilay, Amir Globerson*2012 · 238 citations*
41. **[Towards multidocument summarization by reformulation: progress and prospects ↗](https://doi.org/10.7916/d8sb4f3v) no summary yet**Kathleen R. McKeown et al.*1999 · 228 citations*
42. **[Unsupervised Multilingual Learning for Morphological Segmentation](https://md.research.elamur.ai/free/en/papers/snyder-2008-unsupervised-multilingual-learning-morphological-segmentation/) [Annual Meeting of the Association for Computational Linguistics (ACL)](https://md.research.elamur.ai/free/en/venues/acl/)**Benjamin Snyder, Regina Barzilay*2008 · 222 citations*
43. **[Summarization evaluation methods: Experiments and analysis ↗](https://doi.org/10.7916/d8tb1g77) Columbia Academic Commons (Columbia University) · no summary yet**Kathleen R. McKeown et al.*1998 · 218 citations*
44. **[A Deep Learning Model to Triage Screening Mammograms: A Simulation Study ↗](https://doi.org/10.1148/radiol.2019182908) Radiology · no summary yet**Adam Yala et al.*2019 · 210 citations*
45. **[Multi-Source Domain Adaptation with Mixture of Experts ↗](https://aclanthology.org/D18-1498/) Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing · no summary yet**Jiang Guo, Darsh Shah, Regina Barzilay*2018 · 210 citations*
46. **[Event Discovery in Social Media Feeds ↗](https://aclanthology.org/P11-1040/) Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics: Human Language Technologies · no summary yet**Edward Benson, Aria Haghighi, Regina Barzilay*2011 · 209 citations*
47. **[Simfinder: A flexible clustering tool for summarization ↗](https://doi.org/10.7916/d87s7x4r) no summary yet**Vasileios Hatzivassiloglou et al.*2001 · 207 citations*
48. **[Multi-Institutional Validation of a Mammography-Based Breast Cancer Risk Model ↗](https://doi.org/10.1200/jco.21.01337) Journal of Clinical Oncology · no summary yet**Adam Yala et al.*2021 · 203 citations*
49. **[Using Universal Linguistic Knowledge to Guide Grammar Induction](https://md.research.elamur.ai/free/en/papers/naseem-2010-universal-linguistic-knowledge-guide-grammar/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Tahira Naseem, Harr Chen, Regina Barzilay, et al.*2010 · 201 citations*
50. **[Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network ↗](https://arxiv.org/abs/1709.04555) arXiv (Cornell University) · no summary yet**Wengong Jin et al.*2017 · 184 citations*
51. **[Improving Information Extraction by Acquiring External Evidence with Reinforcement Learning ↗](https://aclanthology.org/D16-1261/) Proceedings of the 2016 Conference on Empirical Methods in Natural Language Processing · no summary yet**Karthik Narasimhan, Adam Yala, Regina Barzilay*2016 · 183 citations*
52. **[High-Risk Breast Lesions: A Machine Learning Model to Predict Pathologic Upgrade and Reduce Unnecessary Surgical Excision ↗](https://doi.org/10.1148/radiol.2017170549) Radiology · no summary yet**Manisha Bahl et al.*2017 · 180 citations*
53. **[Few-shot Text Classification with Distributional Signatures ↗](https://arxiv.org/abs/1908.06039) arXiv (Cornell University) · no summary yet**Yujia Bao et al.*2019 · 175 citations*
54. **[Recent progress in the MIT spoken lecture processing project ↗](https://doi.org/10.21437/interspeech.2007-678) Interspeech (USB) · no summary yet**James Glass et al.*2007 · 171 citations*
55. **[Low-Rank Tensors for Scoring Dependency Structures ↗](https://aclanthology.org/P14-1130/) Proceedings of the 52nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers) · no summary yet**Tao Lei et al.*2014 · 162 citations*
56. **[Inferring Which Medical Treatments Work from Reports of Clinical Trials](https://md.research.elamur.ai/free/en/papers/lehman-2019-inferring-which-medical-treatments-work/) [Conference of the North American Chapter of the Association for Computational Linguistics (NAACL)](https://md.research.elamur.ai/free/en/venues/naacl/)**Eric Lehman, Jay DeYoung, Regina Barzilay, et al.*2019 · 160 citations*
57. **[Molding CNNs for text: non-linear, non-consecutive convolutions ↗](https://aclanthology.org/D15-1180/) Proceedings of the 2015 Conference on Empirical Methods in Natural Language Processing · no summary yet**Tao Lei, Regina Barzilay, Tommi Jaakkola*2015 · 156 citations*
58. **[Ten Pairs to Tag – Multilingual POS Tagging via Coarse Mapping between Embeddings ↗](https://aclanthology.org/N16-1156/) Proceedings of the 2016 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies · no summary yet**Yuan Zhang et al.*2016 · 153 citations*
59. **[The Limitations of Stylometry for Detecting Machine-Generated Fake News](https://md.research.elamur.ai/free/en/papers/schuster-2020-limitations-stylometry-detecting-machine-generated/) [Computational Linguistics](https://md.research.elamur.ai/free/en/venues/cl/)**Tal Schuster, Roei Schuster, Darsh J. Shah, et al.*2020 · 151 citations*
60. **[Columbia Multi-Document Summarization: Approach and Evaluation ↗](https://doi.org/10.7916/d82v2qhf) no summary yet**Kathleen R. McKeown et al.*2001 · 145 citations*
61. **[Using deep learning for dermatologist-level detection of suspicious pigmented skin lesions from wide-field images ↗](https://doi.org/10.1126/scitranslmed.abb3652) Science Translational Medicine · no summary yet**Luis R. Soenksen et al.*2021 · 144 citations*
62. **[Modeling local coherence ↗](https://doi.org/10.3115/1219840.1219858) Annual Meeting of the Association for Computational Linguistics (ACL) · no summary yet**Regina Barzilay, Mirella Lapata*2005 · 142 citations*
63. **[Inducing Temporal Graphs ↗](https://aclanthology.org/W06-1623/) Proceedings of the 2006 Conference on Empirical Methods in Natural Language Processing · no summary yet**Philip Bramsen et al.*2006 · 136 citations*
64. **[Deriving Machine Attention from Human Rationales ↗](https://aclanthology.org/D18-1216/) Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing · no summary yet**Yujia Bao et al.*2018 · 130 citations*
65. **[Learning Multimodal Graph-to-Graph Translation for Molecular Optimization ↗](https://arxiv.org/abs/1812.01070) arXiv (Cornell University) · no summary yet**Wengong Jin et al.*2018 · 130 citations*
66. **[Reading between the Lines: Learning to Map High-Level Instructions to Commands ↗](https://aclanthology.org/P10-1129/) Proceedings of the 48th Annual Meeting of the Association for Computational Linguistics · no summary yet**S.R.K. Branavan, Luke Zettlemoyer, Regina Barzilay*2010 · 130 citations*
67. **[Semi-supervised Question Retrieval with Gated Convolutions ↗](https://aclanthology.org/N16-1153/) Proceedings of the 2016 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies · no summary yet**Tao Lei et al.*2016 · 129 citations*
68. **[sk_p: a neural program corrector for MOOCs ↗](https://doi.org/10.1145/2984043.2989222) ACM SIGPLAN International Conference on Systems, Programming, Languages, and Applications: Software for Humanity (SPLASH) · no summary yet**Yewen Pu et al.*2016 · 121 citations*
69. **[Unsupervised Multilingual Grammar Induction ↗](https://aclanthology.org/P09-1009/) Proceedings of the Joint Conference of the 47th Annual Meeting of the ACL and the 4th International Joint Conference on Natural Language Processing of the AFNLP · no summary yet**Benjamin Snyder, Tahira Naseem, Regina Barzilay*2009 · 119 citations*
70. **[Automated Chemical Reaction Extraction from Scientific Literature ↗](https://doi.org/10.1021/acs.jcim.1c00284) Journal of Chemical Information and Modeling · no summary yet**Jiang Hong Guo et al.*2021 · 118 citations*
71. **[Atom-level enzyme active site scaffolding using RFdiffusion2 ↗](https://doi.org/10.1038/s41592-025-02975-x) Nature Methods · no summary yet**Woody Ahern et al.*2025 · 116 citations*
72. **[Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem ↗](https://arxiv.org/abs/2206.04119) arXiv (Cornell University) · no summary yet**Brian L. Trippe et al.*2022 · 114 citations*
73. **[Aspect-augmented Adversarial Networks for Domain Adaptation ↗](https://aclanthology.org/Q17-1036/) Transactions of the Association for Computational Linguistics · no summary yet**Yuan Zhang, Regina Barzilay, Tommi Jaakkola*2017 · 114 citations*
74. **[Using Semantic Unification to Generate Regular Expressions from Natural Language ↗](https://aclanthology.org/N13-1103/) Proceedings of the 2013 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies · no summary yet**Nate Kushman, Regina Barzilay*2013 · 113 citations*
75. **[Bootstrapping Lexical Choice via Multiple-Sequence Alignment ↗](https://aclanthology.org/W02-1022/) Proceedings of the 2002 Conference on Empirical Methods in Natural Language Processing (EMNLP 2002) · no summary yet**Regina Barzilay, Lillian Lee*2002 · 113 citations*
76. **[Aggregation via Set Partitioning for Natural Language Generation ↗](https://aclanthology.org/N06-1046/) Proceedings of the Human Language Technology Conference of the NAACL, Main Conference · no summary yet**Regina Barzilay, Mirella Lapata*2006 · 109 citations*
77. **[Critical assessment of AI in drug discovery ↗](https://doi.org/10.1080/17460441.2021.1915982) Expert Opinion on Drug Discovery · no summary yet**W. Patrick Walters, Regina Barzilay*2021 · 106 citations*
78. **[Information fusion for multidocument summarization: paraphrasing and generation ↗](https://openalex.org/W88290828) no summary yet**Kathleen R. McKeown, Regina Barzilay*2003 · 106 citations*
79. **[Sentence Ordering in Multidocument Summarization ↗](https://aclanthology.org/H01-1065/) Proceedings of the First International Conference on Human Language Technology Research · no summary yet**Regina Barzilay, Noemie Elhadad, Kathleen R. McKeown*2001 · 106 citations*
80. **[Crystal Diffusion Variational Autoencoder for Periodic Material Generation ↗](https://arxiv.org/abs/2110.06197) arXiv (Cornell University) · no summary yet**Tian Xie et al.*2021 · 105 citations*
81. **[Hierarchical Low-Rank Tensors for Multilingual Transfer Parsing](https://md.research.elamur.ai/free/en/papers/zhang-2015-hierarchical-low-rank-tensors-multilingual/) [Conference on Empirical Methods in Natural Language Processing (EMNLP)](https://md.research.elamur.ai/free/en/venues/emnlp/)**Yuan Zhang, Regina Barzilay*2015 · 103 citations*
82. **[Global Models of Document Structure using Latent Permutations ↗](https://aclanthology.org/N09-1042/) Proceedings of Human Language Technologies: The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics · no summary yet**Harr Chen et al.*2009 · 103 citations*
83. **[The Rules Behind Roles: Identifying speaker role in radio broadcasts ↗](https://doi.org/10.7916/d8pc39q9) no summary yet**Regina Barzilay et al.*2000 · 102 citations*
84. **[Unsupervised Multilingual Learning for POS Tagging ↗](https://aclanthology.org/D08-1109/) Proceedings of the 2008 Conference on Empirical Methods in Natural Language Processing · no summary yet**Benjamin Snyder et al.*2008 · 101 citations*
85. **[EquiBind: Geometric Deep Learning for Drug Binding Structure Prediction ↗](https://arxiv.org/abs/2202.05146) arXiv (Cornell University) · no summary yet**Stärk, Hannes et al.*2022 · 98 citations*
86. **[Neural Generation of Regular Expressions from Natural Language with Minimal Domain Knowledge ↗](https://aclanthology.org/D16-1197/) Proceedings of the 2016 Conference on Empirical Methods in Natural Language Processing · no summary yet**Nicholas Locascio et al.*2016 · 97 citations*
87. **[Hierarchical Generation of Molecular Graphs using Structural Motifs ↗](https://arxiv.org/abs/2002.03230) arXiv (Cornell University) · no summary yet**Wengong Jin, Regina Barzilay, Tommi Jaakkola*2020 · 96 citations*
88. **[Machine Comprehension with Discourse Relations](https://md.research.elamur.ai/free/en/papers/narasimhan-2015-machine-comprehension-discourse-relations/) [Annual Meeting of the Association for Computational Linguistics (ACL)](https://md.research.elamur.ai/free/en/venues/acl/)**Karthik Narasimhan, Regina Barzilay*2015 · 92 citations*
89. **[A Statistical Model for Lost Language Decipherment ↗](https://aclanthology.org/P10-1107/) Proceedings of the 48th Annual Meeting of the Association for Computational Linguistics · no summary yet**Benjamin Snyder, Regina Barzilay, Kevin Knight*2010 · 92 citations*
90. **[MolScribe: Robust Molecular Structure Recognition with Image-to-Graph Generation ↗](https://doi.org/10.1021/acs.jcim.2c01480) Journal of Chemical Information and Modeling · no summary yet**Yujie Qian et al.*2023 · 90 citations*
91. **[Torsional Diffusion for Molecular Conformer Generation ↗](https://arxiv.org/abs/2206.01729) arXiv (Cornell University) · no summary yet**Bowen Jing et al.*2022 · 89 citations*
92. **[Multi-Objective Molecule Generation using Interpretable Substructures ↗](https://arxiv.org/abs/2002.03244) arXiv (Cornell University) · no summary yet**Wengong Jin, Regina Barzilay, Tommi Jaakkola*2020 · 89 citations*
93. **[An Unsupervised Method for Uncovering Morphological Chains ↗](https://aclanthology.org/Q15-1012/) Transactions of the Association for Computational Linguistics · no summary yet**Karthik Narasimhan, Regina Barzilay, Tommi Jaakkola*2015 · 88 citations*
94. **[SE(3) diffusion model with application to protein backbone generation ↗](https://arxiv.org/abs/2302.02277) arXiv (Cornell University) · no summary yet**Jason Yim et al.*2023 · 85 citations*
95. **[Content Models with Attitude ↗](https://aclanthology.org/P11-1036/) Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics: Human Language Technologies · no summary yet**Christina Sauper, Aria Haghighi, Regina Barzilay*2011 · 85 citations*
96. **[Machine Learning Methods to Extract Documentation of Breast Cancer Symptoms From Electronic Health Records ↗](https://doi.org/10.1016/j.jpainsymman.2018.02.016) Journal of Pain and Symptom Management · no summary yet**Alexander W. Forsyth et al.*2018 · 84 citations*
97. **[Learning Document-Level Semantic Properties from Free-Text Annotations ↗](https://aclanthology.org/P08-1031/) Proceedings of ACL-08: HLT · no summary yet**S.R.K. Branavan et al.*2008 · 81 citations*
98. **[Data used for training in "EquiBind: Geometric Deep Learning for Drug Binding Structure Prediction" ↗](https://doi.org/10.5281/zenodo.6034087) Zenodo (CERN European Organization for Nuclear Research) · no summary yet**Hannes Stark et al.*2022 · 79 citations*
99. **[Multilingual Part-of-Speech Tagging: Two Unsupervised Approaches ↗](https://doi.org/10.1613/jair.2843) Journal of Artificial Intelligence Research · no summary yet**Tahira Naseem et al.*2009 · 79 citations*
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