---
title: "BioNLP 2026 — all papers: 51 in our library, the most cited first"
description: "51 works of BioNLP 2026 in our library, the most cited first. Among them: Overview of the PsyDefDetect Shared Task at BioNLP 2026…"
canonical: "https://research.elamur.ai/free/en/venues/bionlp/2026/works/"
---
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# BioNLP 2026: all papers in our library

51 works · the most cited first · [← BioNLP 2026](https://md.research.elamur.ai/free/en/venues/bionlp/2026/)

1. **[Overview of the PsyDefDetect Shared Task at BioNLP 2026: Detecting Levels of Psychological Defense Mechanisms in Supportive Conversations](https://md.research.elamur.ai/free/en/papers/na-2026-overview-psydefdetect-shared-task-bionlp/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Hongbin Na, Zimu Wang, Zhaoming Chen, et al.*2026 · 13 citations*
2. **[Diagnosable ColBERT: Debugging Late-Interaction Retrieval Models Using a Learned Latent Space as Reference](https://md.research.elamur.ai/free/en/papers/remy-2026-diagnosable-colbert-debugging-late-interaction/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**François Remy*2026 · 2 citations*
3. **[Nürnberg NLP at PsyDefDetect: Multi-Axis Voter Ensembles for Psychological Defence Mechanism Classification](https://md.research.elamur.ai/free/en/papers/steigerwald-2026-nurnberg-nlp-psydefdetect-multi-axis/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Philipp Steigerwald, Eric Rudolph, Jens Albrecht*2026 · 2 citations*
4. **[Otter at MedExAct2026: Diverse Encoder Ensemble for Medical Decision Span Detection](https://md.research.elamur.ai/free/en/papers/lowphansirikul-2026-otter-medexact2026-diverse-encoder-ensemble/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Lalita Lowphansirikul, Piyalitt Ittichaiwong*2026 · 1 citation*
5. **[When Retrieval Doesn't Help: A Large-Scale Study of Biomedical RAG](https://md.research.elamur.ai/free/en/papers/nourbakhsh-2026-when-retrieval-doesn-t-help/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Erfan Nourbakhsh, Rocky Slavin, Ke Yang, et al.*2026 · 1 citation*
6. **[TONI-NLP at PsyDefDetect: Defense Mechanism Detection via LLM-based Ensemble Methods](https://md.research.elamur.ai/free/en/papers/paul-2026-toni-nlp-psydefdetect-defense-mechanism/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Durjoy Paul, Arshitha Basavaraj, Callum Chan, et al.*2026 · 1 citation*
7. **[CS_Metro at PsyDefDetect: Detecting Psychological Defense Mechanisms in Mental Health Dialogues with Summarization-Enhanced Transformer Ensembles](https://md.research.elamur.ai/free/en/papers/rebayet-2026-cs-metro-psydefdetect-detecting-psychological/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Oarisa Rebayet, Radiul Walee, Symom Hossain Shohan, et al.*2026 · 1 citation*
8. **[transformer_1376 at PsyDefDetect: A QLoRA-Based Generative Framework for Context-Aware Psychological Defense Mechanism Detection](https://md.research.elamur.ai/free/en/papers/saha-2026-transformer-1376-psydefdetect-qlora-based/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Pritha Saha, Shuvodwip Saha, Anik Mahmud Shanto*2026 · 1 citation*
9. **[LAMAR-2 at MedGenVidQA 2026: Visual Answer Localization in Medical Videos via Multimodal LLM and Context-Augmented Prompting](https://md.research.elamur.ai/free/en/papers/sermsrisuwan-2026-lamar-2-medgenvidqa-2026-visual/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Watcharitpol Sermsrisuwan, Nopporn Lekuthai, Seksan Yoadsanit, et al.*2026 · 1 citation*
10. **[CASPAR: A Context-Aware Span Refinement Approach for Decision Support](https://md.research.elamur.ai/free/en/papers/tao-2026-caspar-context-aware-span-refinement/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Jing Tao, Amir Eskandari, Farhana Zulkernine*2026 · 1 citation*
11. **[Operation-Mechanism Alignment for Reliable Clinical Reasoning over Electronic Health Records](https://md.research.elamur.ai/free/en/papers/tao-2026-operation-mechanism-alignment-reliable-clinical/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Guanyu Tao, Siyao Wang, Yong Xue, et al.*2026 · 1 citation*
12. **[Seahawk at MedGenVidQA 2026: LLM Segment-Range Selection for Medical Visual Answer Localization](https://md.research.elamur.ai/free/en/papers/tian-2026-seahawk-medgenvidqa-2026-llm-segment/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Xiaotian Tian, Gulustan Dogan*2026 · 1 citation*
13. **[DAL Team at PsyDefDetect: From Supervised Encoders to Hierarchical LLM-RAG for Psychological Defense Detection](https://md.research.elamur.ai/free/en/papers/tran-2026-dal-team-psydefdetect-supervised-encoders/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Duc-Luong Tran, Phuong-Anh Chu, Hoang-Dat Do, et al.*2026 · 1 citation*
14. **[VISHC at PsyDefDetect: Mitigating Data Scarcity in Psychological Defense Classification with Context-Aware Synthetic Augmentation](https://md.research.elamur.ai/free/en/papers/vu-2026-vishc-psydefdetect-mitigating-data-scarcity/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Hoang-Thuy-Duong Vu, Quoc-Cuong Pham, Huy-Hieu Pham*2026 · 1 citation*
15. [**Trustworthy NLP for Low-Resource Languages: Agent-Based Uncertainty Modeling for Hebrew Radiology Report Structuring**Hadas Ben Atya, Naama Gavrielov, Zvi Badash, et al.*2026*](https://md.research.elamur.ai/free/en/papers/atya-2026-trustworthy-nlp-low-resource-languages/)
16. **[KGRxn-LLM: Knowledge Graph Enhanced Large Language Models for Molecular Reaction Reasoning](https://md.research.elamur.ai/free/en/papers/liu-2026-kgrxn-llm-knowledge-graph-enhanced/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Weichen Liu, Qiyao Xue, Yuyang Wu, et al.*2026*
17. **[Systematic Evaluation of the Quality of Synthetic Clinical Notes Rephrased by LLMs at Million-Note Scale](https://md.research.elamur.ai/free/en/papers/liu-2026-systematic-evaluation-quality-synthetic-clinical/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Jinghui Liu, Sarvesh Soni, Anthony Nguyen*2026*
18. **[Effects of Adaptive Pretraining in Specialized Domains for Named Entity Recognition](https://md.research.elamur.ai/free/en/papers/lynam-2026-effects-adaptive-pretraining-specialized-domains/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Jack Lynam, Sam Henry*2026*
19. **[VERICITE: Evaluating Sentence-Level Citation Faithfulness in Retrieval-Augmented Medical Question Answering](https://md.research.elamur.ai/free/en/papers/ma-2026-vericite-evaluating-sentence-level-citation/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Yixian Ma, Bohao Chu, Norbert Fuhr*2026*
20. **[From Rules to Predictions: Federated Tabular Learning with LLM Reasoning](https://md.research.elamur.ai/free/en/papers/mahanipour-2026-rules-predictions-federated-tabular-learning/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Afsaneh Mahanipour, Hana Khamfroush*2026*
21. **[AAbAAC: An Annotated Corpus for Autoimmunity Information Extraction](https://md.research.elamur.ai/free/en/papers/maury-2026-aabaac-annotated-corpus-autoimmunity-information/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Fabien Maury, Solène Grosdidier, Maud de Dieuleveult, et al.*2026*
22. **[NM at CRF Filling 2026: A Two-Stage LLM Pipeline for Clinical CRF Population](https://md.research.elamur.ai/free/en/papers/morabito-2026-nm-crf-filling-2026-two/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Niccolò Morabito*2026*
23. **[FACT: Functional Group Alignment and Consistency in Token Space for Structure-aware Molecular Representation Learning](https://md.research.elamur.ai/free/en/papers/nam-2026-fact-functional-group-alignment-consistency/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Hyeonyeong Nam, Woojae Choi, Deok-Joong Lee, et al.*2026*
24. **[FHexchange: Resources for Family Health History Extraction and Normalization From Consumer Dialog Sources](https://md.research.elamur.ai/free/en/papers/nguyen-2026-fhexchange-resources-family-health-history/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Michelle Nguyen, Nidhi Soley, Ayah Zirikly, et al.*2026*
25. **[IndicMedDialog: A Parallel Multi-Turn Medical Dialogue Dataset for Accessible Healthcare in Indic Languages](https://md.research.elamur.ai/free/en/papers/nigam-2026-indicmeddialog-parallel-multi-turn-medical/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Shubham Kumar Nigam, Suparnojit Sarkar, Piyush Patel*2026*
26. **[MeSHClass-ES and AnatEM-ES: Open Resources for Spanish Biomedical NLP](https://md.research.elamur.ai/free/en/papers/novoa-2026-meshclass-es-anatem-es-open/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Santiago Martinez Novoa, Lina Gomez Mesa, Juan Prieto, et al.*2026*
27. **[CoreELM: An Open-Source Framework for Aligning Large Language Models to Embedding Spaces](https://md.research.elamur.ai/free/en/papers/ondov-2026-coreelm-open-source-framework-aligning/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Brian Ondov, Chia-Hsuan Chang, Yujia Zhou, et al.*2026*
28. **[Probing and Steering Uncertainty in Biomedical Language Models: Representational Structure and Behavioral Limits](https://md.research.elamur.ai/free/en/papers/pal-2026-probing-steering-uncertainty-biomedical-language/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Debmalya Pal*2026*
29. **[Evaluation of Multilingual Text Simplification for the Mental Health Domain: Exploring Small Language Models](https://md.research.elamur.ai/free/en/papers/pelloni-2026-evaluation-multilingual-text-simplification-mental/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Olga Pelloni, Sandra Just, Lars Bongo*2026*
30. **[MedCAT v2: a modular, extensible architecture for clinical named entity recognition and linking under real-world privacy and compute constraints](https://md.research.elamur.ai/free/en/papers/ratas-2026-medcat-v2-modular-extensible-architecture/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Mart Ratas, Thomas Searle, Adam Sutton, et al.*2026*
31. **[Towards Unified Factuality Evaluation for Biomedical QA and Summarization: Aligning Metrics with Clinical Use-Cases](https://md.research.elamur.ai/free/en/papers/roy-2026-unified-factuality-evaluation-biomedical-qa/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Mahule Roy, Subhas Roy*2026*
32. **[Reliable Automated Triage in Spanish Clinical Notes: A Hybrid Framework for Risk-Aware HIV Suspicion Identification](https://md.research.elamur.ai/free/en/papers/sanchez-2026-reliable-automated-triage-spanish-clinical/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Rodrigo Morales-Sánchez, Soto Montalvo, Raquel Martínez*2026*
33. **[A Multi-View Framework for Cross-Domain Nutrition Misinformation Detection in Social Media](https://md.research.elamur.ai/free/en/papers/shah-2026-multi-view-framework-cross-domain/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Vishwaa Shah, Indika Kahanda, Andrea Arikawa, et al.*2026*
34. **[Do Syntactic Features Help Biomedical Relation Extraction? An Empirical Study of Verb Token and Dependency Graph Augmentation](https://md.research.elamur.ai/free/en/papers/sikder-2026-do-syntactic-features-help-biomedical/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Mustafa Sikder, Ernest Kwegyir-Afful*2026*
35. **[MAX-EVAL-11: A Large Scale Benchmark for Evaluating Large Language Models on Full-Spectrum ICD-11 Medical Coding](https://md.research.elamur.ai/free/en/papers/singh-2026-max-eval-11-large-scale/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Ujjwal Singh, Sarthak Deshwal, Nitish Dube, et al.*2026*
36. **[Medical Context Variation: A source of impairment for Event classification](https://md.research.elamur.ai/free/en/papers/sinha-2026-medical-context-variation-source-impairment/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Aman Sinha, Marianne Clausel, Mathieu Constant, et al.*2026*
37. **[Reading Between the Lines: Toward Translating Verbose Patient-authored Messages into Clinician-Formulated Questions](https://md.research.elamur.ai/free/en/papers/soni-2026-reading-between-lines-translating-verbose/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Sarvesh Soni, Madeline Bittner, Dina Demner-Fushman*2026*
38. **[Expert-Guided Schema-Based Structured Extraction from CONSORT Diagrams Using Vision-Language Models](https://md.research.elamur.ai/free/en/papers/stachura-2026-expert-guided-schema-based-structured/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Damian Stachura, Bartosz Przechera, Monika Opałek, et al.*2026*
39. **[Fast, Accurate, and Local Conversion of MIMIC-IV to OMOP with DBT](https://md.research.elamur.ai/free/en/papers/sutton-2026-fast-accurate-local-conversion-mimic/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Adam Sutton, Niko Moller-Grell, Thomas Searle, et al.*2026*
40. **[Gold Label Errors in the SciFact Benchmark: An LLM-Assisted Annotation Audit](https://md.research.elamur.ai/free/en/papers/sylvestre-2026-gold-label-errors-scifact-benchmark/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Julien Sylvestre*2026*
41. **[CENT: Context Engineering Framework for Normalization of Clinical Trial Procedures](https://md.research.elamur.ai/free/en/papers/taneja-2026-cent-context-engineering-framework-normalization/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Sanya Taneja, Ziqing Ji, Hans Verstraete, et al.*2026*
42. **[VerbaNexAI at ClinicalSkillQA: From Visual Evidence to Procedural Order A Two-Stage Generative Vision-Language Framework for ClinSkillQA](https://md.research.elamur.ai/free/en/papers/tovar-2026-verbanexai-clinicalskillqa-visual-evidence-procedural/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Andrea Menco Tovar, Jairo E. Serrano, Edwin Puertas, et al.*2026*
43. **[CrossDDI: Cross-Source Evidence-Grounded Drug-Drug Interaction Verification](https://md.research.elamur.ai/free/en/papers/wang-2026-crossddi-cross-source-evidence-grounded/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Hui Wang, Bohao Chu, Norbert Fuhr*2026*
44. **[Interpretable ICD Code Classification with Faithful Sentence Extraction](https://md.research.elamur.ai/free/en/papers/wang-2026-interpretable-icd-code-classification-faithful/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Yichen Wang, Lian Hong, Masato Mizogaki, et al.*2026*
45. **[Training Biomedical Retrievers From Large-Scale Citation Contexts](https://md.research.elamur.ai/free/en/papers/wang-2026-training-biomedical-retrievers-large-scale/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Xing David Wang, Duy Le Thanh, Ulf Leser*2026*
46. **[Post Hoc Agentic Refinement for Improving Precision in Multilingual Clinical Text De-identification](https://md.research.elamur.ai/free/en/papers/xu-2026-post-hoc-agentic-refinement-improving/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Justin Xu, Alistair Johnson, Thomas Lin, et al.*2026*
47. **[Treating Decoder-Only LLMs as Encoders: A Simple and Effective Fine-tuning Approach for Named Entity Recognition](https://md.research.elamur.ai/free/en/papers/yano-2026-treating-decoder-only-llms-as/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Ken Yano, Hiroya Takamura*2026*
48. **[BioTopicXplor: A Web Tool for Interactive Exploration of PubMed Literature through Reproducible Topics.](https://md.research.elamur.ai/free/en/papers/yeganova-2026-biotopicxplor-web-tool-interactive-exploration/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Lana Yeganova, Donald Comeau, Won Kim, et al.*2026*
49. **[When Demographic Sensitivity Isn't What It Seems: Baseline-Aware Counterfactual Audits for Clinical NLP](https://md.research.elamur.ai/free/en/papers/yoo-2026-when-demographic-sensitivity-isn-t/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Hyunwoo Yoo*2026*
50. **[Uncertainty-Aware Multi-Label Routing of Clinical Text to Surveillance Pathways](https://md.research.elamur.ai/free/en/papers/zecevic-2026-uncertainty-aware-multi-label-routing/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Agathe Zecevic, Sebastian Zeki, Angus Roberts*2026*
51. **[Towards a Radiologist Imitation Framework for 3D CT Diagnosis with Multimodal LLMs](https://md.research.elamur.ai/free/en/papers/zhang-2026-radiologist-imitation-framework-3d-ct/) [BioNLP](https://md.research.elamur.ai/free/en/venues/bionlp/)**Kaidi Zhang, Zhiyuan Yan, Gao Cheng, et al.*2026*
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